STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50325.1Glycosyl transferase family 39. (588 aa)    
Predicted Functional Partners:
AEI50322.1
NAD-dependent epimerase/dehydratase.
 
     0.841
AEI50324.1
Transketolase.
 
     0.799
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
     0.766
AEI50900.1
Tetratricopeptide TPR_1 repeat-containing protein.
  
     0.754
AEI49877.1
Hypothetical protein.
  
     0.749
AEI50321.1
Transketolase central region.
 
     0.743
Runsl_0856
PKD domain containing protein.
  
     0.728
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
     0.727
AEI47993.1
Glycosyl transferase, group 1.
  
     0.712
AEI50358.1
Hypothetical protein.
  
     0.708
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.