STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50366.1Peptidase C10 streptopain. (440 aa)    
Predicted Functional Partners:
AEI50365.1
Hypothetical protein.
       0.762
AEI50364.1
Hypothetical protein.
       0.741
AEI47448.1
Tetratricopeptide TPR_1 repeat-containing protein.
  
 
 0.650
AEI51509.1
Forkhead-associated protein.
   
 
 0.590
AEI50367.1
TonB-dependent receptor plug.
       0.556
AEI50363.1
Phosphoesterase.
       0.520
AEI51507.1
Forkhead-associated protein.
   
 
 0.465
AEI51506.1
Protein serine/threonine phosphatase.
  
 
 0.437
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.