STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50427.1Efflux transporter, RND family, MFP subunit. (352 aa)    
Predicted Functional Partners:
AEI50426.1
Acriflavin resistance protein.
 
  0.985
AEI50428.1
Outer membrane efflux protein.
  0.978
AEI49343.1
Acriflavin resistance protein.
 
  0.919
AEI51916.1
Acriflavin resistance protein.
 
  0.918
AEI47138.1
Acriflavin resistance protein.
 
  0.908
AEI47334.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.858
AEI49207.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.844
AEI49648.1
Acriflavin resistance protein.
 
  0.833
AEI48217.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
  0.809
AEI49934.1
Heavy metal efflux pump, CzcA family.
 
 
 0.779
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.