STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50436.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
AEI47046.1
Hypothetical protein.
  
     0.774
AEI49849.1
Hypothetical protein.
  
     0.774
AEI48465.1
Hypothetical protein.
  
     0.758
AEI50437.1
Peptidase S8 and S53 subtilisin kexin sedolisin.
 
     0.747
AEI49458.1
Hypothetical protein.
  
     0.731
AEI48514.1
Hypothetical protein.
  
     0.719
AEI47476.1
Hypothetical protein.
  
     0.713
AEI49882.1
Gliding motility-associated protein GldM.
  
     0.702
AEI49883.1
Gliding motility associated protein GldN.
  
     0.685
AEI51555.1
Hypothetical protein.
  
     0.667
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.