STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50492.1Succinyl-CoA ligase (ADP-forming) subunit beta. (408 aa)    
Predicted Functional Partners:
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
 0.999
AEI51043.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.987
AEI49388.1
2-oxoglutarate dehydrogenase, E1 subunit.
 
 0.984
AEI49389.1
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase.
 0.982
AEI51042.1
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
 
 0.978
AEI51658.1
Dihydrolipoyllysine-residue succinyltransferase.
 
 0.976
AEI51866.1
Citrate synthase I.
  
 0.969
AEI46685.1
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
  
 0.952
AEI51223.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 0.951
AEI51935.1
methylmalonyl-CoA mutase, large subunit.
  
 
 0.934
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.