STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50527.1Hypothetical protein. (694 aa)    
Predicted Functional Partners:
AEI50526.1
Hypothetical protein.
 
     0.810
AEI50488.1
Hypothetical protein.
 
     0.790
AEI50705.1
Double-transmembrane region domain protein.
 
     0.784
AEI46525.1
Protein of unknown function DUF58.
 
     0.780
AEI46588.1
Hypothetical protein.
  
    0.778
AEI48194.1
Tetratricopeptide domain protein.
  
     0.775
AEI47067.1
Hypothetical protein.
 
     0.773
AEI51027.1
Hypothetical protein.
  
     0.772
AEI47886.1
Hypothetical protein.
  
     0.764
AEI50713.1
Sulfate transporter/antisigma-factor antagonist STAS.
  
     0.734
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.