STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50534.1GTP-binding protein TypA. (604 aa)    
Predicted Functional Partners:
AEI47030.1
GMP synthase (glutamine-hydrolyzing).
  
  
 0.759
AEI47591.1
Ribosomal protein S9.
 
    0.711
AEI48241.1
Ribosomal protein L1.
   
  
 0.655
AEI51720.1
50S ribosomal protein L35.
  
    0.633
AEI48244.1
DNA-directed RNA polymerase subunit beta.
  
    0.621
AEI47589.1
Elongation factor Ts.
  
  
 0.614
AEI49950.1
Trigger factor.
  
  
 0.595
AEI46522.1
GTP-binding protein YchF.
 
  
 0.582
AEI50717.1
Glutamate synthase (ferredoxin).
  
  
 0.564
AEI49249.1
ABC transporter related protein.
 
   
 0.556
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.