STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50575.1Hypothetical protein. (519 aa)    
Predicted Functional Partners:
AEI46895.1
Response regulator receiver and SARP domain protein.
  
     0.775
AEI50547.1
RagB/SusD domain-containing protein.
  
     0.768
AEI48932.1
Hypothetical protein.
  
     0.759
AEI51338.1
Conserved repeat domain protein.
  
     0.759
AEI50556.1
Alpha-galactosidase.
 
     0.748
AEI50576.1
Hypothetical protein.
       0.746
AEI50546.1
TonB-dependent receptor plug.
  
     0.722
AEI47964.1
Hypothetical protein.
  
     0.716
AEI51419.1
Conserved repeat domain protein.
  
     0.699
AEI51229.1
RagB/SusD domain-containing protein.
  
     0.677
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.