STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50582.1Viral A-type inclusion protein. (143 aa)    
Predicted Functional Partners:
AEI50581.1
Electron transport protein SCO1/SenC.
       0.707
AEI50583.1
DNA repair protein RecN.
       0.679
AEI50580.1
Cytochrome c class I.
       0.552
Runsl_0856
PKD domain containing protein.
  
     0.551
AEI50317.1
Hypothetical protein.
  
     0.525
AEI49813.1
Hypothetical protein.
  
     0.502
AEI47253.1
Hypothetical protein.
  
     0.496
AEI50585.1
Hypothetical protein.
       0.485
AEI50584.1
Hypothetical protein.
       0.484
AEI46636.1
Glycosyl transferase family 39.
  
     0.470
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.