STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50586.1Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase. (403 aa)    
Predicted Functional Partners:
AEI50136.1
Phosphopantetheine adenylyltransferase.
 
  
 0.941
AEI48519.1
Putative transcriptional acitvator, Baf family.
 
 
 0.934
AEI50541.1
Putative transcriptional acitvator, Baf family.
 
 
 0.932
AEI51694.1
Acyl carrier protein phosphodiesterase.
     
  0.900
AEI47353.1
Pantothenate synthetase.
 
 
 0.883
AEI50585.1
Hypothetical protein.
      0.876
AEI49560.1
Dephospho-CoA kinase.
 
 0.860
AEI51415.1
Aspartate transaminase.
  
  0.834
AEI50583.1
DNA repair protein RecN.
 
    0.828
AEI47201.1
Primosomal protein N'.
 
    0.812
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.