STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50586.1Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase. (403 aa)    
Predicted Functional Partners:
AEI50136.1
Phosphopantetheine adenylyltransferase.
 
 
 0.945
AEI48519.1
Putative transcriptional acitvator, Baf family.
 
  
 0.932
AEI50541.1
Putative transcriptional acitvator, Baf family.
 
  
 0.929
AEI51694.1
Acyl carrier protein phosphodiesterase.
     
  0.900
AEI47353.1
Pantothenate synthetase.
 
  
 0.884
AEI50585.1
Hypothetical protein.
      0.877
AEI50583.1
DNA repair protein RecN.
 
    0.849
AEI51415.1
Aspartate transaminase.
  
  0.830
AEI50959.1
Cystathionine beta-lyase.
    
  0.804
AEI47201.1
Primosomal protein N'.
 
    0.750
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.