STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50599.1Hypothetical protein. (735 aa)    
Predicted Functional Partners:
AEI49271.1
Hypothetical protein.
  
     0.733
AEI47413.1
Hypothetical protein.
  
     0.551
AEI50600.1
Peptidase S9 prolyl oligopeptidase active site domain protein.
 
     0.543
AEI47950.1
Hypothetical protein.
  
     0.525
AEI49377.1
Conserved repeat domain protein.
  
     0.517
AEI50627.1
Hypothetical protein.
  
     0.479
AEI49299.1
Isopenicillin-N epimerase.
  
     0.466
AEI50336.1
UbiA prenyltransferase.
 
     0.465
AEI48708.1
Amidohydrolase.
  
     0.464
AEI50639.1
OmpA/MotB domain protein.
  
     0.453
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.