STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50606.1Conserved hypothetical protein CHP02687. (837 aa)    
Predicted Functional Partners:
AEI50605.1
Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase.
 
     0.951
AEI49455.1
Chaperone protein dnaJ.
  
 0.936
AEI50611.1
Hypothetical protein.
 
     0.896
AEI47122.1
Translation elongation factor G.
   
 0.887
AEI50612.1
Hypothetical protein.
 
    0.860
AEI50613.1
Domain of unknown function DUF1788.
 
     0.857
AEI50614.1
Protein of unknown function DUF1819 putative inner membrane.
 
     0.857
AEI51886.1
Heat shock protein Hsp90.
  
 0.836
AEI50607.1
Putative transcriptional regulator.
 
     0.804
AEI48208.1
Hypothetical protein.
    
 0.779
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.