STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50627.1Hypothetical protein. (877 aa)    
Predicted Functional Partners:
AEI50630.1
Integrase family protein.
 
   
 0.842
AEI51298.1
Peptidase C1A papain.
  
     0.726
AEI49153.1
Hypothetical protein.
  
     0.722
AEI46846.1
Hypothetical protein.
  
    0.704
AEI48691.1
Auxin Efflux Carrier.
  
     0.701
AEI48152.1
GTP-binding protein engA.
   
  
 0.697
AEI51604.1
Replicative DNA helicase.
  
 
 0.669
AEI46807.1
Hypothetical protein.
  
     0.651
AEI51111.1
Double-transmembrane region domain protein.
  
     0.626
AEI47950.1
Hypothetical protein.
  
     0.620
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.