STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50630.1Integrase family protein. (413 aa)    
Predicted Functional Partners:
AEI50627.1
Hypothetical protein.
 
   
 0.842
AEI50629.1
Hypothetical protein.
       0.776
AEI46812.1
Integrase family protein.
  
     0.738
AEI49673.1
Integrase family protein.
  
     0.707
AEI50665.1
Hypothetical protein.
  
     0.693
AEI46846.1
Hypothetical protein.
  
    0.653
AEI46807.1
Hypothetical protein.
  
     0.604
AEI50661.1
DNA primase.
  
   
 0.588
AEI49675.1
Mobilizable transposon, excision protein, putative.
  
   
 0.570
AEI46845.1
Hypothetical protein.
  
     0.525
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.