STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50638.1Dihydrofolate reductase region. (163 aa)    
Predicted Functional Partners:
AEI51932.1
Thymidylate synthase.
 
 
 0.993
AEI47917.1
Glycine hydroxymethyltransferase.
  
 
 0.920
AEI51593.1
Methionine synthase.
    
 0.917
AEI49066.1
Dihydrofolate reductase.
  
  
 
0.915
AEI50894.1
FolC bifunctional protein.
     
 0.912
AEI47900.1
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
    
 0.911
AEI48745.1
Phosphoribosylglycinamide formyltransferase.
   
 
 0.910
AEI48128.1
Formyltetrahydrofolate deformylase.
    
 0.908
AEI48711.1
Aminomethyltransferase.
  
 
 0.908
AEI51427.1
Phenylalanine 4-monooxygenase.
     
 0.904
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.