STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50655.1Phosphatidylserine decarboxylase proenzyme. (219 aa)    
Predicted Functional Partners:
AEI50146.1
CDP-diacylglycerol/serine O-phosphatidyltransferase.
 
 
 0.986
AEI51775.1
Phospholipase C, phosphocholine-specific.
     
 0.901
AEI49566.1
Protein recA.
    
 0.717
AEI50656.1
Glutamate dehydrogenase (NAD(P)(+)).
  
  
 0.652
AEI50654.1
N-acetylmuramic acid 6-phosphate etherase.
       0.636
AEI50025.1
Zn-dependent hydrolase of the beta-lactamase fold-like protein.
 
 
   0.481
AEI48540.1
Zn-dependent hydrolase.
 
 
   0.463
AEI50442.1
YjeF-related protein.
  
    0.419
Runsl_1922
Beta-lactamase domain-containing protein.
 
 
   0.417
AEI49397.1
Phosphatidate cytidylyltransferase.
     
 0.410
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.