STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50746.1Integral membrane sensor signal transduction histidine kinase. (369 aa)    
Predicted Functional Partners:
AEI49492.1
Response regulator receiver protein.
 
   0.868
AEI49493.1
MCP methyltransferase, CheR-type.
      0.868
AEI49758.1
MCP methyltransferase, CheR-type.
      0.817
AEI47785.1
Response regulator receiver protein.
 
 
   0.808
AEI47415.1
Response regulator receiver protein.
 
 
   0.807
AEI47790.1
Response regulator receiver protein.
 
 
   0.807
AEI48999.1
Response regulator receiver protein.
 
 
   0.796
AEI47470.1
Response regulator receiver.
 
 
   0.795
Runsl_5328
Response regulator receiver protein.
 
   0.785
AEI47416.1
Putative PAS/PAC sensor protein.
 
 
 0.772
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.