Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Runsl_4437Carbamoyl-phosphate synthase, large subunit. (942 aa)    
Predicted Functional Partners:
AEI48096.1
Carbamoyl-phosphate synthase, small subunit.
 0.999
AEI48187.1
Aspartate carbamoyltransferase.
 
 0.999
AEI46642.1
Argininosuccinate synthase.
 
 
 0.989
AEI51391.1
Allantoinase.
 
 0.989
AEI48752.1
Amidophosphoribosyltransferase.
 
 
 0.988
AEI48444.1
Allantoinase.
 
 0.987
AEI48211.1
Dihydroorotase, multifunctional complex type.
 
 0.984
AEI47740.1
Dihydroorotate dehydrogenase.
 
 
 0.961
AEI50717.1
Glutamate synthase (ferredoxin).
  
 
 0.961
AEI51538.1
Orotate phosphoribosyltransferase.
 
 
 0.948
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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