STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50776.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
AEI48108.1
Ribosomal protein S5.
    
 0.879
AEI48776.1
WD40 repeat-containing protein.
  
 0.858
AEI48124.1
Ribosomal protein L4/L1e.
    
  0.834
AEI48133.1
NAD(P)H-quinone oxidoreductase subunit K.
    
 0.787
AEI51797.1
NAD(P)H-quinone oxidoreductase subunit K.
    
 0.787
AEI47843.1
NAD(P)H-quinone oxidoreductase subunit H.
    
 0.712
AEI51799.1
NAD(P)H-quinone oxidoreductase subunit H.
    
 0.712
AEI50969.1
Ribosomal protein S15.
   
  0.705
AEI48884.1
Squalene/phytoene synthase.
    
 0.671
AEI48134.1
NAD(P)H-quinone oxidoreductase subunit J.
   
 0.635
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.