STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50787.1Restriction modification system DNA specificity domain protein. (453 aa)    
Predicted Functional Partners:
AEI51570.1
Site-specific DNA-methyltransferase (adenine-specific).
 
 
 0.898
AEI50249.1
Type I restriction-modification system, M subunit.
 
 
 0.882
AEI49865.1
N-6 DNA methylase.
 
 
 0.880
AEI50785.1
Restriction endonuclease, type I, EcoRI, R subunit/Type III.
 
  
 0.866
AEI51573.1
Type I site-specific deoxyribonuclease, HsdR family.
 
  
 0.834
AEI49712.1
N-6 DNA methylase.
 
 
 0.786
AEI49871.1
Type I site-specific deoxyribonuclease, HsdR family.
 
  
 0.774
AEI50788.1
Hypothetical protein.
       0.773
AEI50250.1
Type I site-specific deoxyribonuclease, HsdR family.
 
  
 0.761
AEI46784.1
N-6 DNA methylase.
  
 
 0.607
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.