STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50800.1Membrane-bound dehydrogenase domain protein. (950 aa)    
Predicted Functional Partners:
AEI49496.1
FG-GAP repeat-containing protein.
     0.962
AEI51893.1
Protein of unknown function DUF1080.
     0.943
AEI47091.1
Hypothetical protein.
 
     0.704
AEI46739.1
Lipolytic protein G-D-S-L family.
 
     0.649
Runsl_0537
Quinoprotein glucose dehydrogenase.
 
     0.644
AEI48048.1
Blue (type 1) copper domain protein.
 
     0.639
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
    0.612
AEI47298.1
NADH:flavin oxidoreductase/NADH oxidase.
 
     0.609
AEI50226.1
Ig family protein.
  
     0.602
AEI47319.1
Hypothetical protein.
  
    0.598
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.