STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50830.1Protein of unknown function DUF1080. (206 aa)    
Predicted Functional Partners:
AEI49795.1
Protein of unknown function DUF1080.
 
     0.954
AEI49683.1
Protein of unknown function DUF1080.
    
0.929
AEI48639.1
Protein of unknown function DUF1080.
    
0.927
AEI51076.1
Protein of unknown function DUF1080.
    
0.927
AEI51484.1
Protein of unknown function DUF1080.
    
0.926
AEI46873.1
Protein of unknown function DUF1080.
 
     0.795
AEI50227.1
Oxidoreductase domain protein.
 
     0.770
AEI50415.1
Oxidoreductase domain protein.
 
     0.739
AEI47698.1
Oxidoreductase domain protein.
  
     0.724
AEI48795.1
Oxidoreductase domain protein.
  
     0.718
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.