STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50842.1ROK family protein. (308 aa)    
Predicted Functional Partners:
AEI47106.1
1-phosphofructokinase.
  
 
 0.913
AEI50381.1
Glucose-6-phosphate isomerase.
  
 
 0.913
AEI46553.1
6-phosphofructokinase.
    
 0.912
AEI49339.1
Xylose isomerase.
    
 0.912
AEI47623.1
Glycosyl hydrolase family 32 domain protein.
  
 
 0.910
AEI50747.1
Glycosyl hydrolase family 32 domain protein.
  
 
 0.910
AEI48010.1
Glucosamine-6-phosphate isomerase.
    
 0.909
AEI46595.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
  
 
 0.906
AEI51063.1
Hypothetical protein.
  
 
 0.906
AEI49400.1
Mannose-6-phosphate isomerase type II.
    
 0.905
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.