STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50844.1Hypothetical protein. (556 aa)    
Predicted Functional Partners:
AEI50843.1
Uncharacterized protein family UPF0310.
       0.792
AEI47514.1
Hypothetical protein.
  
     0.755
AEI48234.1
Hypothetical protein.
  
     0.754
AEI49877.1
Hypothetical protein.
  
     0.752
AEI47031.1
Hypothetical protein.
  
     0.751
AEI49561.1
Hypothetical protein.
  
     0.749
AEI49631.1
Tetratricopeptide domain protein.
  
     0.746
AEI50317.1
Hypothetical protein.
  
     0.732
AEI50863.1
Hypothetical protein.
  
     0.723
Runsl_5229
Hypothetical protein.
  
     0.713
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.