STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50850.1Chaperonin Cpn10. (126 aa)    
Predicted Functional Partners:
AEI51166.1
60 kDa chaperonin.
  
 0.991
AEI49456.1
Protein grpE.
  
 
 0.854
AEI47136.1
Heat shock protein 70.
  
 
 0.808
AEI51312.1
Chaperone protein dnaK.
  
 
 0.808
AEI51886.1
Heat shock protein Hsp90.
   
 
 0.799
AEI49238.1
ATP-dependent hsl protease ATP-binding subunit hslU.
   
  
 0.784
AEI46686.1
ATP-dependent protease hslV.
   
  
 0.768
AEI49455.1
Chaperone protein dnaJ.
 
 
 0.696
AEI51609.1
ATPase AAA-2 domain protein.
 
 
 0.601
AEI48243.1
50S ribosomal protein L7/L12.
   
  
 0.596
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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