STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50869.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
AEI48203.1
Hypothetical protein.
 
 
 
 0.932
AEI49811.1
Peptidoglycan glycosyltransferase.
 
 
 0.821
AEI48206.1
Cell cycle protein.
 
 
 
 0.797
AEI50221.1
Penicillin-binding protein 2.
  
 
 0.797
AEI48951.1
Hypothetical protein.
   
 
 0.769
AEI50220.1
Cell cycle protein.
   
 
 0.769
AEI50870.1
Enolase.
  
    0.687
AEI50543.1
Protein of unknown function DUF1239.
 
 
 
 0.533
AEI50868.1
Protein tyrosine phosphatase.
       0.527
AEI49362.1
Hypothetical protein.
  
     0.487
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.