STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50880.1Glycerol-3-phosphate dehydrogenase. (550 aa)    
Predicted Functional Partners:
AEI50099.1
Glycerol kinase.
 
 0.998
AEI51782.1
Major intrinsic protein.
 
  
 0.942
AEI50174.1
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)).
  
 0.934
AEI48643.1
Glycerol-3-phosphate acyltransferase.
    
 0.916
AEI50045.1
Phospholipid/glycerol acyltransferase.
  
 
 0.907
AEI48447.1
Phospholipid/glycerol acyltransferase.
  
 
 0.815
AEI48897.1
Phospholipid/glycerol acyltransferase.
  
 
 0.815
AEI51304.1
Transcriptional regulator, DeoR family.
 
  
 0.651
AEI50879.1
Galactokinase.
     
 0.602
AEI49667.1
NADH dehydrogenase (ubiquinone).
   
 
 0.541
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.