STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50892.1Sporulation domain-containing protein. (373 aa)    
Predicted Functional Partners:
AEI50894.1
FolC bifunctional protein.
  
    0.694
AEI50893.1
Hypothetical protein.
 
     0.644
AEI51922.1
Hypothetical protein.
  
     0.609
AEI50331.1
Mandelate racemase/muconate lactonizing protein.
  
     0.587
AEI50891.1
Hypothetical protein.
 
     0.582
Runsl_5359
Endonuclease/exonuclease/phosphatase.
  
     0.558
AEI50590.1
Hypothetical protein.
 
   
 0.550
AEI51311.1
Smr protein/MutS2.
  
     0.539
AEI48856.1
Hypothetical protein.
  
     0.532
AEI50135.1
Hypothetical protein.
  
     0.532
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.