STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50900.1Tetratricopeptide TPR_1 repeat-containing protein. (479 aa)    
Predicted Functional Partners:
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
    0.770
AEI49877.1
Hypothetical protein.
  
     0.764
AEI48234.1
Hypothetical protein.
  
     0.762
AEI50325.1
Glycosyl transferase family 39.
  
     0.754
AEI46636.1
Glycosyl transferase family 39.
  
     0.753
AEI51037.1
Hypothetical protein.
  
     0.750
AEI51183.1
TPR repeat-containing protein.
  
     0.745
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
     0.743
AEI47886.1
Hypothetical protein.
 
 
   0.741
AEI49838.1
Colicin V production protein.
  
     0.734
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.