STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50900.1Tetratricopeptide TPR_1 repeat-containing protein. (479 aa)    
Predicted Functional Partners:
AEI51795.1
Protein of unknown function DUF303 acetylesterase.
  
  
 0.769
AEI49877.1
Hypothetical protein.
  
     0.764
AEI48234.1
Hypothetical protein.
  
     0.762
AEI50325.1
Glycosyl transferase family 39.
  
     0.754
AEI46636.1
Glycosyl transferase family 39.
  
     0.753
AEI47886.1
Hypothetical protein.
 
 
   0.752
AEI51196.1
Protein of unknown function DUF303 acetylesterase.
  
 
   0.751
AEI51037.1
Hypothetical protein.
  
     0.750
AEI49631.1
Tetratricopeptide domain protein.
 
  0.746
AEI50317.1
Hypothetical protein.
  
   0.746
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.