STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50907.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
AEI48190.1
Hypothetical protein.
  
     0.730
AEI51270.1
Hypothetical protein.
  
     0.646
AEI47031.1
Hypothetical protein.
  
     0.609
AEI49570.1
DNA uptake protein and related DNA-binding protein-like protein.
  
     0.609
AEI48238.1
Preprotein translocase, SecE subunit.
  
     0.599
AEI49541.1
Hypothetical protein.
  
     0.572
AEI49881.1
Gliding motility-associated protein GldL.
  
     0.571
AEI49398.1
Hypothetical protein.
  
     0.564
AEI50906.1
N-acylglucosamine 2-epimerase.
       0.563
AEI49882.1
Gliding motility-associated protein GldM.
  
     0.532
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.