STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50926.1Ribonuclease, Rne/Rng family. (519 aa)    
Predicted Functional Partners:
AEI50968.1
Polyribonucleotide nucleotidyltransferase.
  
 
 0.904
AEI50870.1
Enolase.
   
 
 0.832
AEI51899.1
Signal peptidase I.
 
  
 0.625
AEI50927.1
Hypothetical protein.
       0.584
AEI50069.1
Transcription termination factor Rho.
 
  
 0.573
AEI48490.1
Protein-export membrane protein SecD.
 
  
 0.561
AEI50929.1
Histone family protein DNA-binding protein.
  
  
 0.537
AEI50925.1
Hypothetical protein.
       0.536
AEI46692.1
Methionyl-tRNA synthetase.
  
  
 0.532
AEI51705.1
Diaminopimelate epimerase.
  
   
 0.532
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.