STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50932.1Single-strand binding protein. (158 aa)    
Predicted Functional Partners:
Runsl_4484
Single-strand DNA-binding protein.
  
  
 
0.916
AEI51356.1
Single-strand binding protein.
  
  
 
0.907
AEI47201.1
Primosomal protein N'.
 
 
 
 0.826
AEI51677.1
30S ribosomal protein S6.
  
  
 0.821
AEI49479.1
DNA polymerase III, alpha subunit.
   
 
 0.803
AEI48486.1
DNA polymerase I.
 
 0.802
AEI47590.1
Ribosomal protein S2.
  
  0.764
Runsl_3621
DNA polymerase III gamma/tau subunits-like protein.
    
 
 0.741
AEI51692.1
DNA polymerase III, subunits gamma and tau.
    
 
 0.741
AEI48835.1
Ribosomal protein S7.
 
   0.740
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.