STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI50962.1Gliding motility-associated protein GldC. (116 aa)    
Predicted Functional Partners:
AEI51455.1
Protein of unknown function DUF2480.
  
     0.763
AEI46485.1
Hypothetical protein.
  
     0.759
AEI48136.1
Hypothetical protein.
  
     0.754
AEI47039.1
acyl-CoA reductase.
  
     0.740
AEI49881.1
Gliding motility-associated protein GldL.
  
     0.639
AEI50971.1
Hypothetical protein.
  
     0.637
AEI47482.1
UPF0747 protein.
  
     0.636
AEI49649.1
Protein of unknown function DUF490.
  
     0.634
AEI49882.1
Gliding motility-associated protein GldM.
  
     0.628
AEI47404.1
Regulatory protein MarR.
  
     0.623
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.