STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI50992.1Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. (473 aa)    
Predicted Functional Partners:
AEI47921.1
Capsular exopolysaccharide family.
 
  
 0.925
AEI51021.1
Capsular exopolysaccharide family.
 
  
 0.925
AEI47937.1
GDP-mannose 4,6-dehydratase.
  
  
 0.572
AEI50443.1
Polysaccharide biosynthesis protein CapD.
  
 0.556
AEI51010.1
Glycosyl transferase family 2.
 
  
 0.501
AEI50310.1
Hypothetical protein.
  
  
 0.472
AEI51022.1
Polysaccharide export protein.
 
  
 0.464
AEI47380.1
Glycosyl transferase family 2.
 
  
 0.443
AEI50991.1
Hypothetical protein.
       0.441
AEI48575.1
Mannose-1-phosphate guanylyltransferase.
  
  
 0.439
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.