STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51003.1Glucose-1-phosphate thymidylyltransferase. (286 aa)    
Predicted Functional Partners:
AEI51004.1
dTDP-glucose 4,6-dehydratase.
 
 0.997
AEI48780.1
dTDP-glucose 4,6-dehydratase.
 
 0.994
AEI49568.1
Nucleotide sugar dehydrogenase.
  
 
 0.965
AEI51002.1
dTDP-4-dehydrorhamnose reductase.
  
 0.955
AEI46985.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
  
 
 0.918
AEI49421.1
UTP-glucose-1-phosphate uridylyltransferase.
  
 
0.918
AEI49569.1
UDP-glucuronate decarboxylase.
  
 
 0.916
AEI51005.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
 0.901
AEI48309.1
Glucose-1-phosphate thymidylyltransferase.
  
  
 
0.900
AEI48575.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.850
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.