STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51025.1Adenosylhomocysteinase. (438 aa)    
Predicted Functional Partners:
AEI51109.1
Methionine synthase vitamin-B12 independent.
  
 
 0.964
AEI51593.1
Methionine synthase.
  
 
 0.952
AEI48139.1
MTA/SAH nucleosidase.
    
 0.919
AEI48543.1
Cys/Met metabolism pyridoxal-phosphate-dependent protein.
  
 0.917
AEI50660.1
Cystathionine gamma-lyase.
  
 0.917
AEI51679.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
     
 0.915
AEI47375.1
DNA-cytosine methyltransferase.
     
 0.903
AEI47650.1
C-5 cytosine-specific DNA methylase.
     
 0.903
AEI51400.1
DNA-cytosine methyltransferase.
     
 0.903
AEI50959.1
Cystathionine beta-lyase.
     
  0.900
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.