STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51040.1Hypothetical protein. (955 aa)    
Predicted Functional Partners:
AEI49491.1
Multi-sensor hybrid histidine kinase.
  
  
 0.845
AEI48148.1
PorT-related protein.
  
   
 0.773
AEI49882.1
Gliding motility-associated protein GldM.
  
   
 0.769
AEI47492.1
Hypothetical protein.
  
     0.765
AEI50400.1
Hypothetical protein.
  
     0.763
AEI47886.1
Hypothetical protein.
  
     0.761
AEI49649.1
Protein of unknown function DUF490.
  
     0.745
AEI47339.1
Hypothetical protein.
  
     0.739
AEI49398.1
Hypothetical protein.
  
     0.739
AEI50496.1
Hypothetical protein.
  
     0.738
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.