STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51042.1Succinate dehydrogenase or fumarate reductase, flavoprotein subunit. (662 aa)    
Predicted Functional Partners:
AEI51043.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 0.999
AEI51041.1
Succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family.
 
 0.997
AEI50492.1
Succinyl-CoA ligase (ADP-forming) subunit beta.
 
 0.978
AEI49876.1
succinyl-CoA synthetase, alpha subunit.
  
 0.971
AEI49293.1
Fumarate hydratase class II.
 
 0.970
AEI46890.1
Betaine-aldehyde dehydrogenase.
   
 0.914
AEI51801.1
NADH-quinone oxidoreductase, F subunit.
  
 
 0.820
AEI49320.1
Fumarylacetoacetase.
  
 
  0.813
AEI51168.1
Aspartate transaminase.
     
 0.804
AEI51415.1
Aspartate transaminase.
     
 0.804
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.