STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51056.1Aryldialkylphosphatase. (321 aa)    
Predicted Functional Partners:
AEI51057.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
 
     0.931
AEI51058.1
Hypothetical protein.
 
     0.922
AEI51060.1
3-oxoacyl-(acyl-carrier-protein) reductase.
 
     0.699
AEI51107.1
Hypothetical protein.
 
     0.675
AEI51059.1
ROK family protein.
 
     0.674
AEI51055.1
Oxidoreductase domain protein.
 
     0.649
AEI47579.1
Hypothetical protein.
  
     0.637
AEI51083.1
Glycoside hydrolase family 39.
  
    0.637
AEI51085.1
Hypothetical protein.
  
    0.601
AEI51086.1
Hypothetical protein.
  
    0.545
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.