STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51059.1ROK family protein. (297 aa)    
Predicted Functional Partners:
AEI46985.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
 
 
 0.920
AEI50381.1
Glucose-6-phosphate isomerase.
  
 
 0.913
AEI51343.1
Aldose 1-epimerase.
  
 
 0.906
AEI48520.1
Beta-galactosidase.
     
 0.902
AEI50873.1
HAD-superfamily hydrolase, subfamily IA, variant 3.
   
 
  0.902
AEI46659.1
CBS domain containing protein.
  
 
 0.839
AEI51060.1
3-oxoacyl-(acyl-carrier-protein) reductase.
 
    0.830
AEI49339.1
Xylose isomerase.
    
 0.825
AEI48993.1
Fructose-bisphosphate aldolase, class II.
    
 0.823
AEI47713.1
Transaldolase.
  
 
 0.820
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.