STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51061.1Transcriptional regulator, AraC family. (308 aa)    
Predicted Functional Partners:
AEI50813.1
Transcriptional regulator, AraC family.
  
   0.734
AEI50180.1
Transcriptional regulator, AraC family.
 
   0.681
AEI46957.1
Transcriptional regulator, AraC family.
  
   0.666
AEI47188.1
Transcriptional regulator, AraC family.
  
   0.622
AEI49503.1
Transcriptional regulator, AraC family.
  
   0.579
AEI51060.1
3-oxoacyl-(acyl-carrier-protein) reductase.
     
 0.556
AEI51059.1
ROK family protein.
     
 0.555
AEI49924.1
Transcriptional regulator, AraC family.
  
   0.550
AEI48650.1
Transcriptional regulator, AraC family.
  
   0.537
AEI47976.1
Transcriptional regulator, AraC family.
 
   0.524
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.