STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51094.1L-iditol 2-dehydrogenase. (337 aa)    
Predicted Functional Partners:
AEI51091.1
Dimethylmenaquinone methyltransferase.
 
     0.669
AEI51090.1
Short-chain dehydrogenase/reductase SDR.
 
     0.624
AEI51080.1
2-deoxy-D-gluconate 3-dehydrogenase.
    0.582
AEI51093.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.562
AEI51092.1
Hypothetical protein.
       0.542
AEI51089.1
SSS sodium solute transporter superfamily.
 
    0.530
AEI49957.1
Alcohol dehydrogenase GroES domain protein.
 
  
0.502
AEI49029.1
Hypothetical protein.
  
    0.495
AEI51085.1
Hypothetical protein.
 
     0.493
AEI49956.1
Esterase.
  
     0.485
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.