STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51102.1Beta-lactamase. (418 aa)    
Predicted Functional Partners:
AEI51103.1
tRNA dimethylallyltransferase.
       0.737
AEI51104.1
Hypothetical protein.
       0.737
AEI50051.1
Peptidase S41.
  
     0.571
Runsl_4441
Protein of unknown function DUF187.
  
     0.563
AEI49774.1
Acyltransferase 3.
  
     0.561
AEI51105.1
3-oxoacyl-(acyl-carrier-protein) reductase.
       0.513
AEI51106.1
N-acylmannosamine kinase.
       0.513
AEI51101.1
Thioredoxin.
       0.508
AEI47215.1
OmpA/MotB domain protein.
  
     0.496
AEI47552.1
Beta-lactamase.
  
     0.475
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.