STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51112.1Protein of unknown function DUF58. (293 aa)    
Predicted Functional Partners:
AEI51111.1
Double-transmembrane region domain protein.
 
    0.902
AEI51110.1
Hypothetical protein.
 
     0.901
AEI51114.1
Hypothetical protein.
 
    0.804
Runsl_4799
ATPase associated with various cellular activities AAA_3.
 
  
 0.797
AEI51122.1
ATPase associated with various cellular activities AAA_3.
 
  
 0.749
Runsl_4802
Peptidase U62 modulator of DNA gyrase.
 
     0.744
AEI51116.1
Peptidase U62 modulator of DNA gyrase.
 
     0.742
AEI47528.1
Von Willebrand factor type A.
 
    0.691
AEI47373.1
ATPase associated with various cellular activities AAA_3.
 
  
 0.690
AEI50102.1
Von Willebrand factor type A.
 
    0.647
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.