STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51145.1Alcohol dehydrogenase zinc-binding domain protein. (364 aa)    
Predicted Functional Partners:
AEI51144.1
Major facilitator superfamily MFS_1.
 
     0.848
Runsl_4831
Hypothetical protein.
       0.746
AEI48272.1
NADPH:quinone reductase.
 
  
 0.537
AEI49159.1
NADPH:quinone reductase.
 
  
 0.537
AEI50368.1
Haloacid dehalogenase domain protein hydrolase.
 
    0.503
AEI47601.1
NAD(P)H quinone oxidoreductase, PIG3 family.
 
  
 0.466
AEI51146.1
Lipolytic protein G-D-S-L family.
       0.442
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.