STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51167.1Anti-sigma H sporulation factor, LonB. (831 aa)    
Predicted Functional Partners:
AEI51166.1
60 kDa chaperonin.
  
 0.911
AEI49238.1
ATP-dependent hsl protease ATP-binding subunit hslU.
  
  
 0.908
AEI49456.1
Protein grpE.
  
  
 0.892
AEI46686.1
ATP-dependent protease hslV.
   
  
 0.875
AEI51886.1
Heat shock protein Hsp90.
  
 
 0.839
AEI49455.1
Chaperone protein dnaJ.
  
 
 0.838
AEI51312.1
Chaperone protein dnaK.
 
 0.831
AEI47136.1
Heat shock protein 70.
 
 0.823
AEI48400.1
Sigma 54 interacting domain protein.
 
 
 0.766
AEI49528.1
ATP-dependent metalloprotease FtsH.
 
 
 0.746
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.