STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI51177.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
AEI51067.1
Hypothetical protein.
  
     0.729
AEI48209.1
Hypothetical protein.
 
     0.696
AEI46821.1
Peptidase M14 carboxypeptidase A.
  
     0.651
AEI51708.1
Methyltransferase type 11.
  
     0.629
AEI47309.1
Hypothetical protein.
  
     0.628
AEI51576.1
Glycoside hydrolase family 43.
  
     0.615
AEI49488.1
Lipolytic protein G-D-S-L family.
  
     0.605
AEI50363.1
Phosphoesterase.
  
     0.600
AEI51176.1
Carboxylesterase type B.
 
     0.571
AEI49124.1
TetR family transcriptional regulator.
  
     0.532
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.