STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51190.1Histidinol-phosphate transaminase. (393 aa)    
Predicted Functional Partners:
AEI51869.1
Imidazoleglycerol-phosphate dehydratase.
 
 0.997
AEI49544.1
Prephenate dehydrogenase.
 
 
 0.982
AEI47271.1
Histidine biosynthesis bifunctional protein hisIE.
  
  
 0.957
AEI50235.1
Chorismate mutase.
  
 
 0.940
AEI48601.1
Histidinol phosphate phosphatase HisJ family.
  
 
 0.909
AEI51428.1
4-hydroxyphenylpyruvate dioxygenase.
    
 0.907
AEI49477.1
Catalase-peroxidase.
     
 0.904
AEI51427.1
Phenylalanine 4-monooxygenase.
     
 0.904
AEI50163.1
D-amino-acid dehydrogenase.
   
 
 0.901
AEI51189.1
Hypothetical protein.
 
     0.899
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.