STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51192.1TonB-dependent receptor plug. (1053 aa)    
Predicted Functional Partners:
AEI51191.1
Hypothetical protein.
 
   0.917
AEI48328.1
Hypothetical protein.
 
   0.813
AEI47537.1
Hypothetical protein.
 
   0.796
AEI49694.1
Hypothetical protein.
 
 
   0.771
AEI47733.1
Hypothetical protein.
 
   0.749
AEI48678.1
TonB-dependent receptor.
  
  
  0.741
AEI49989.1
Hypothetical protein.
 
   0.696
AEI50334.1
OmpA/MotB domain protein.
     
 0.679
AEI47539.1
Hypothetical protein.
 
 
   0.675
AEI49135.1
Hypothetical protein.
 
   0.633
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.