STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI51212.1tRNA modification GTPase mnmE. (441 aa)    
Predicted Functional Partners:
AEI48196.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG.
 0.975
AEI47212.1
Ribosomal RNA small subunit methyltransferase G.
 
  
 0.938
AEI47105.1
GTP-binding protein engB.
  
 
 
 0.929
AEI48106.1
Ribosomal protein L15.
  
 
 
 0.918
AEI47941.1
50S ribosomal protein L21.
 
 
 
 0.914
AEI49455.1
Chaperone protein dnaJ.
  
 
 0.902
AEI47592.1
Ribosomal protein L13.
    
 
 0.885
AEI48241.1
Ribosomal protein L1.
  
 
 0.884
AEI49035.1
Glucose-inhibited division protein A.
  
 0.884
AEI48240.1
Ribosomal protein L11.
    
   0.879
Your Current Organism:
Runella slithyformis
NCBI taxonomy Id: 761193
Other names: R. slithyformis DSM 19594, Runella slithyformis DSM 19594, Runella slithyformis str. DSM 19594, Runella slithyformis strain DSM 19594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.